Curriculum Vitae
Education:
Work experience:
- 2001-present: Scientist at Center for Estuarine and Marine Ecology, NIOO-KNAW, Yerseke, The Netherlands. Started in the Workgroup Ecosystem Studies and since mid 2005 in the Workgroup Marine Microbiology.
- 1995-2001: Post-doc at Center for Estuarine and Marine Ecology, NIOO-KNAW, Yerseke, The Netherlands.
- 1994-1995: Associate scientist in the EU-funded project on ‘Fate of low molecular intermediates in anaerobic sediments’ at the Center for Limnology, NIOO-KNAW, Nieuwersluis, The Netherlands.
- 1989-1994: PhD research. Promotor prof.dr. A.J.B. Zehnder (Department of Micobiology, Agricultural University Wageningen) and co-promotor dr. T.E. Cappenberg (Netherlands Institute of Ecology - Centre for Limnology (NIOO-CL), Nieuwersluis,The Netherlands).
Projects
Darwin project 'Present and past role of chemoautotropy in marine sediments'
Funding for 4 years PhD (2010-2014), cooperation with Filip Meysman (ES-CEME) and Laura Villanueva and Stefan Schouten (NIOZ)
ZKO-North Sea project ' Primary production in the North Sea: Changes in resource limitation and energy transfer (CHARLET)'
Funding for 4 years PhD (2010-2014), cooperation with Corina Brussaard (NIOZ) and Jef Huisman (UvA)
NWO-VIDI project ‘Linking microbial community structure and biogeochemical functioning in coastal marine sediments’
Funding for 5 years post-doc, 4 years PhD student and 4 years technician (2005-2009)
NWO Flemish/Dutch cooperation project ‘Tidal freshwater marshes as nitrogen sinks: benthic compartment dynamics and an assessment of their role in estuarine nitrogen retention’
Funding for 6 years post-doc and 5 year technician, (2002-2007).
Selected Publications
Drigo, B., A. S. Pijl, H. Duyts, A. Kielak, H. A. Gamper, M. J. Houtekamer, H. T. S. Boschker, P. L. E. Bodelier, A. S. Whiteley, J. A. van Veen, and G. A. Kowalchuk. 2010. Shifting carbon flow from roots into associated microbial communities in response to elevated atmospheric CO2. Proceedings of the National Academy of Sciences of the United States of America 107:10938-10942.
Dijkman, N. A., H. T. S. Boschker, J. J. Middelburg, and J. C. Kromkamp. 2009. Group-specific primary production based on stable-isotope labeling of phospholipid-derived fatty acids. Limnology and Oceanography-Methods 7:612-625.
Miyatake, T., B. J. MacGregor, and H. T. S. Boschker. 2009. Linking Microbial Community Function to Phylogeny of Sulfate-Reducing Deltaproteobacteria in Marine Sediments by Combining Stable Isotope Probing with Magnetic-Bead Capture Hybridization of 16S rRNA. Applied and Environmental Microbiology 75:4927-4935.
Gribsholt, B., B. Veuger, A. Tramper, J. J. Middelburg, and H. T. S. Boschker. 2009. Long-term N-15-nitrogen retention in tidal freshwater marsh sediment: Elucidating the microbial contribution. Limnology and Oceanography 54:13-22.
Boschker, H. T. S., T. C. W. Moerdijk-Poortvliet, P. van Breugel, M. Houtekamer, and J. J. Middelburg. 2008. A versatile method for stable carbon isotope analysis of carbohydrates by high-performance liquid chromatography/isotope ratio mass spectrometry. Rapid Communications in Mass Spectrometry 22:3902-3908.
Bouillon, S., and H. T. S. Boschker. 2006. Bacterial carbon sources in coastal sediments: a cross-system analysis based on stable isotope data of biomarkers. Biogeosciences 3:175-185.
Veuger, B., D. van Oevelen, H. T. S. Boschker, and J. J. Middelburg. 2006. Fate of peptidoglycan in an intertidal sediment: An in situ C-13-labeling study. Limnology and Oceanography 51:1572-1580.
Gribsholt, B. , H.T.S. Boschker, E. Struyf, M. Andersson, A. Tramper, L. De Brabandere, S. van Damme, N. Brion, P. Meire, F. Dehairs, J.J. Middelburg & C.H.R. Heip. 2005
A whole ecosystem 15N labeling study on ammonium processing in a tidal freshwater marsh.
Limnol. Oceaongr. Vol 50: 1945-1959.
Publisher: http://www.aslo.org/lo/toc/vol_50/issue_6/1945.pdf
Boschker, H.T.S., Kromkamp, J.C., Middelburg, J.J. 2005
Biomarker and carbon isotopic constraints on bacterial and algal community structure and functioning in a turbid, tidal estuary
Limnol. Oceanogr. Vol. 50, Issue 1, p70-80
Publisher: http://www.aslo.org/lo/toc/vol_50/issue_1/0070.pdf
Veuger, B., J.J. Middelburg, H.T.S. Boschker & M. Houtekamer 2005
Analysis of 15N incorporation into D-Alanine: a new method for tracing nitrogen uptake by bacteria.
Limnol. Oceanogr. Methods. 3: 230-240.
Moodley, L., Middelburg, J.J., Soetaert, K., Boschker, H.T.S., Herman, P.M.J., Heip, C.H.R. 2005
Similar rapid response to phytodetritus deposition in shallow and deep-sea sediments
J. Mar. Res. Vol. 63, Issue 2, p457-469
Boschker, H.T.S. 2004
Linking microbial community structure and functioning: stable isotope (13C) labeling in combination with PLFA analysis.
In: Kowalchuk, G.A., F.J. de Bruijn, I.M. Head, A.D. Akkermans & J.D.van Elsas, (Eds.) Molecular Microbial Ecology Manual II. Kluwer Academic Publishers, Dordrecht, The Netherlands. pp. 1673-1688
Van den Meersche, K., Middelburg, J.J., Soetaert, K., van Rijswijk, P., Boschker, H.T.S., Heip, C.H.R. 2004
Carbon-nitrogen coupling and algal-bacterial interactions during an experimental bloom: Modeling a 13 C-tracer experiment.
Limnology and Oceanography Vol. 49: 862-878
Wuchter, C., Schouten, S., Boschker, H.T.S., Damste, J.S.S. 2003
Bicarbonate uptake by marine Crenarchaeota
FEMS Microbiol. Lett. Vol. 219, Issue 2, p203-207
Boschker, H.T.S., Middelburg, J.J. 2002
Stable isotopes and biomarkers in microbial ecology
FEMS Microbiol. Ecol. Vol. 40, p85-95
Moodley, L., Middelburg, J.J., Boschker, H.T.S., Duineveld, G.C.A., Pel, R., Herman, P.M.J., Heip, C.H.R. 2002
Bacteria and Foraminifera: key players in a short-term deep-sea benthic response to phytodetritus
Mar. Ecol.-Prog. Ser. Vol. 236, p23-29
Boschker, H.T.S., de Graaf, W., Koster, M., Meyer-Reil, L.A., Cappenberg, T.E. 2001
Bacterial populations and processes involved in acetate and propionate consumption in anoxic brackish sediment
FEMS Microbiol. Ecol. Vol. 35, p97-103
Boschker, H.T.S., Wielemaker, A., Schaub, B.E.M., Holmer, M. 2000
Limited coupling of macrophyte production and bacterial carbon cycling in the sediments of Zostera spp. meadows
Marine Ecology-Progress Series Vol. 203, p181-189
Middelburg, J.J., Barranguet, C., Boschker, H.T.S., Herman, P.M.J., Moens, T., Heip, C.H.R. 2000
The fate of intertidal microphytobenthos carbon: An in situ 13 C-labeling study
Limnology and Oceanography Vol. 45, p1224-1234
Boschker, H.T.S., de Brouwer, J.F.C., Cappenberg, T.E. 1999
The contribution of macrophyte-derived organic matter to microbial biomass in salt-marsh sediments: Stable carbon isotope analysis of microbial biomarkers
Limnology and Oceanography Vol. 44, p309-319
Boschker, H.T.S., Nold, S.C., Wellsbury, P., Bos, D., de Graaf, W., Pel, R., Parkes, R.J., Cappenberg, T.E. 1998
Direct linking of microbial populations to specific biogeochemical processes by 13 C-labelling of biomarkers
Nature Vol. 392, Issue 6678, p801-805
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